2024

1   Self-organized tissue mechanics underlie embryonic regulation
 Paolo Caldarelli, Alexander Chamolly, Aurélien Villedieu, Olinda Alegria-Prévot, Carole Phan, Jerome Gros, Francis Corson
Nature
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2   Inverse blebs operate as hydraulic pumps during mouse blastocyst formation
 Markus F Schliffka, Julien G Dumortier, Diane Pelzer, Arghyadip Mukherjee, Jean-Léon Maître
Nature Cell Biology
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3   [∼Re] Exploration in Model-based Reinforcement Learning by Empirically Estimating Learning Progress
 Augustin Chartouny, Jean-Pierre Nadal, Mehdi Khamassi
The ReScience journal
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4   A two-dimensional vertex model for curvy cell-cell interfaces at the subcellular scale
 Kyungeun Kim, J M Schwarz, Martine Ben Amar
Journal of the Royal Society Interface
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5   Long-wavelength traveling waves of vasomotion modulate the perfusion of cortex
 Thomas Broggini, Jacob Duckworth, Xiang Ji, Rui Liu, Xinyue Xia, Philipp Mächler, Iftach Shaked, Leon Paul Munting, Satish Iyengar, Michael Kotlikoff, Susanne van Veluw, Massimo Vergassola, Gal Mishne, David Kleinfeld
Neuron
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6   Giant organelle vesicles to uncover intracellular membrane mechanics and plasticity
 Alexandre Santinho, Maxime Carpentier, Julio Lopes Sampaio, Mohyeddine Omrane, Abdou Rachid Thiam
Nature Communications
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7   Perilipin membrane integration determines lipid droplet heterogeneity in differentiating adipocytes
 Mario Majchrzak, Ozren Stojanović, Dalila Ajjaji, Kalthoum Ben M’barek, Mohyeddine Omrane, Abdou Rachid Thiam, Robin Klemm
Cell Reports
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8   Reconstitution of ORP-mediated lipid exchange coupled to PI4P metabolism
 Nicolas Fuggetta, Nicola Rigolli, Maud Magdeleine, Amazigh Hamaï, Agnese Seminara, Guillaume Drin
Proceedings of the National Academy of Sciences of the United States of America
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9   Resource-rational account of sequential effects in human prediction
 Arthur Prat-Carrabin, Florent Meyniel, Rava Azeredo da Silveira
eLife
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2023

10   Two-fluid dynamics and micron-thin boundary layers shape cytoplasmic flows in early Drosophila embryos
 Claudio Hernández-López, Alberto Puliafito, Yitong Xu, Ziqi Lu, Stefano Di Talia, Massimo Vergassola
Proceedings of the National Academy of Sciences of the United States of America
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11   LC3 conjugation to lipid droplets
 Mohyeddine Omrane, Thomas Melia, Abdou Rachid Thiam
Autophagy
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12   Curvature in Biological Systems: Its Quantification, Emergence, and Implications across the Scales
 Barbara Schamberger, Ricardo Ziege, Karine Anselme, Martine Ben Amar, Michał Bykowski, André P G Castro, Amaia Cipitria, Rhoslyn A Coles, Rumiana Dimova, Michaela Eder, Sebastian Ehrig, Luis M Escudero, Myfanwy E Evans, Paulo R Fernandes, Peter Fratzl, Liesbet Geris, Notburga Gierlinger, Edouard Hannezo, Aleš Iglič, Jacob J K Kirkensgaard, Philip Kollmannsberger, Łucja Kowalewska, Ioannis Papantoniou, Laurent Pieuchot, Tiago H V Pires, Lars D Renner, Andrew O Sageman‐furnas, Gerd E Schröder‐turk, Anupam Sengupta, Vikas R Sharma, Antonio Tagua, Caterina Tomba, Xavier Trepat, Sarah L Waters, Edwina F Yeo, Andreas Roschger, Cécile M Bidan, John W C Dunlop
Advanced Materials
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13   Metamorphoses of the flow past an obstacle of a resonantly driven bistable polariton fluid
 Vincent Hakim, Simon Pigeon, Amandine Aftalion
Physical Review B
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14   A comprehensive neural simulation of slow-wave sleep and highly responsive wakefulness dynamics
 Jennifer S. Goldman, Lionel Kusch, David Aquilue, Bahar Hazal Yalçınkaya, Damien Depannemaecker, Kevin Ancourt, Trang-Anh Nghiem, Viktor Jirsa, Alain Destexhe
Frontiers in Computational Neuroscience
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15   Beta oscillations and waves in motor cortex can be accounted for by the interplay of spatially structured connectivity and fluctuating inputs
 Ling Kang, Jonas Ranft, Vincent Hakim
eLife
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16   Sticky issues in turbulent transport
 Antonio Celani, Gautam Reddy, Massimo Vergassola
Annales Henri Poincaré
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2022

17   HaloTag-based reporters for sparse labeling and cell tracking
 Lydie Couturier, Juan Luna, Khalil Mazouni, Claire Mestdagh, Minh-Son Phan, Francis Corson, Francois Schweisguth
Fly
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18   Manipulating the nature of embryonic mitotic waves
 Luke Hayden, Woonyung Hur, Massimo Vergassola, Stefano Di Talia
Current Biology - CB
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19   Alternation emerges as a multi-modal strategy for turbulent odor navigation
 Nicola Rigolli, Gautam Reddy, Agnese Seminara, Massimo Vergassola
eLife
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20   Waves in embryonic development
 Stefano Di Talia, Massimo Vergassola
Annual review of biophysics and bioengineering
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21   Cullin-5 mutants reveal collective sensing of the nucleocytoplasmic ratio in Drosophila embryogenesis
 Luke Hayden, Anna Chao, Victoria E Deneke, Massimo Vergassola, Alberto Puliafito, Stefano Di Talia
Current Biology - CB
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22   ICU Bed Availability Monitoring and analysis in the Grand Est region of France during the COVID-19 epidemic
 Consortium Icubam, Laurent Bonnasse-Gahot, Maxime Dénès, Gabriel Dulac-Arnold, Sertan Girgin, François Husson, Valentin Iovene, Julie Josse, Antoine Kimmoun, François Landes, Jean-Pierre Nadal, Romain Primet, Frederico Quintao, Pierre Guillaume Raverdy, Vincent Rouvreau, Olivier Teboul, Roman Yurchak
Statistique et Société
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23   Affinity maturation for an optimal balance between long-term immune coverage and short-term resource constraints
 Victor Chardès, Massimo Vergassola, Aleksandra Walczak, Thierry Mora
Proceedings of the National Academy of Sciences of the United States of America
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24   Categorical Perception: A Groundwork for Deep Learning
 Laurent Bonnasse-Gahot, Jean-Pierre Nadal
Neural Computation
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25   Confidence-controlled Hebbian learning efficiently extracts category membership from stimuli encoded in view of a categorization task
 Kevin Berlemont, Jean-Pierre Nadal
Neural Computation
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2021

26   Fluid mechanics of free subduction on a sphere. Part 1. The axisymmetric case
 Alexander Chamolly, Neil M. Ribe
Journal of Fluid Mechanics
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27   Modeling the mechanics of growing epithelia with a bilayer plate theory
 Joseph Ackermann, Paul-Qiuyang Qu, Loïc Le Goff, Martine Ben Amar
The European Physical Journal Plus
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28   Machine learning and computational modeling approaches towards detection of pathological activity markers in the cortex
 Ivan Lazarevich
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29   Geometry of Gene Regulatory Dynamics
 David A Rand, Archishman Raju, Meritxell Sáez, Francis Corson, Eric D Siggia
Proceedings of the National Academy of Sciences of the United States of America
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30   Origin of gradients in lipid density and surface tension between connected lipid droplet and bilayer
 Abdou Rachid Thiam, Aymeric Chorlay, Lionel Forêt
Biophysical Journal
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31   Human Inference in Changing Environments with Temporal Structure
 Arthur Prat-Carrabin, Robert Wilson, Jonathan Cohen, Rava Azeredo da Silveira
Psychological Review
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32   Biases and Variability from Costly Bayesian Inference
 Arthur Prat-Carrabin, Florent Meyniel, Misha Tsodyks, Rava Azeredo da Silveira
Entropy
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33   Reciprocal stabilization of glycine receptors and gephyrin scaffold proteins at inhibitory synapses
 Thomas Chapdelaine, Vincent Hakim, Antoine Triller, Jonas Ranft, Christian G Specht
Biophysical Journal
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34   Fat inclusions strongly alter membrane mechanics
 Alexandre Santinho, Aymeric Chorlay, Lionel Foret, Abdou Rachid Thiam
Biophysical Journal
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2020

35   From growing bubbles and dendrites to biological forms
 Vincent Hakim
Comptes Rendus. Mécanique
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36   Synchronization, stochasticity and phase waves in neuronal networks with spatially-structured connectivity
 Anirudh Kulkarni, Jonas Ranft, Vincent Hakim
Frontiers in Computational Neuroscience
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37   Tissue-wide coordination of epithelium-to-neural stem cell transition in the Drosophila optic lobe requires Neuralized
 Chloé Shard, Juan Luna-Escalante, François Schweisguth
Journal of Cell Biology
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38   From neural coding to decision-making
 Kevin Berlemont
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39   Detection of Topological Materials with Machine Learning
 Nikolas Claussen, B. Andrei Bernevig, Nicolas Regnault
Physical Review B
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40   Cholinergic switch between two types of slow waves in cerebral cortex
 Trang-Anh E. Nghiem, Núria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo Di Volo, Alain Destexhe
Cerebral Cortex
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41   Nonlinear neural network dynamics accounts for human confidence in a sequence of perceptual decisions
 Kevin Berlemont, Jean-Remy Martin, Jérôme Sackur, Jean-Pierre Nadal
Scientific Reports
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42   Scaling laws and snap-through events in indentation of perforated membranes
 Fei Jia, Martine Ben Amar
Journal of the Mechanics and Physics of Solids
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43   A tensile ring drives tissue flows to shape the gastrulating amniote embryo
 Mehdi Saadaoui, Didier Rocancourt, Julian Roussel, Francis Corson, Jerome Gros
Science
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44   Tribute to an exemplary man: Yves Couder
 Martine Ben Amar, Laurent Limat, Olivier Pouliquen, Emmanuel Villermaux
Comptes Rendus. Mécanique
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45   Tip growth in morpho-elasticity
 Martine Ben Amar, Julien Dervaux
Comptes Rendus. Mécanique
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46   Lifetime of a structure evolving by cluster aggregation and particle loss, and application to postsynaptic scaffold domains
 Vincent Hakim, Jonas Ranft
Physical Review E
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47   The geometry of information coding in correlated neural populations
 Rava Azeredo da Silveira, Fred Rieke
Annual Review of Neuroscience
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2019

48   Modeling morphogenesis on epithelial tissues : from forces to geometry and back
 Diego Contreras
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49   Bridging single neuron dynamics to global brain states
 Jennifer S Goldman, Núria Tort-Colet, Matteo Di Volo, Eduarda Susin, Jules Bouté, Mélissa Dali, Mallory Carlu, Trang-Anh Nghiem, Tomasz Gorski, Alain Destexhe
Frontiers in Systems Neuroscience
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50   Regulation of Notch output dynamics via specific E(spl)-HLH factors during bristle patterning in Drosophila
 Lydie Couturier, Khalil Mazouni, Francis Corson, François Schweisguth
Nature Communications
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65
Publications
6
Années

2024
9
2021
9
2020
13

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